Projects per year
Personal profile
Biography
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
-
SDG 3 Good Health and Well-being
-
SDG 8 Decent Work and Economic Growth
-
SDG 9 Industry, Innovation, and Infrastructure
-
SDG 14 Life Below Water
Fingerprint
- 1 Similar Profiles
Collaborations and top research areas from the last five years
Projects
- 3 Active
-
SINFONIA: Sustainable Agroecosystems, Food Innovation, and Artistic Practices for Climate Adaptation
Pinto, E. (PI), Bexiga, M. G. (CoPI), Costa, P. R. (CoPI), Morais, A. M. M. B. (Researcher), Gomes, A. M. (Researcher), Martins, A. P. (Researcher), Rangel, A. O. S. S. (Researcher), Santos, C. S. D. (Researcher), Manaia, C. (Researcher), Kekhasharú Tavaria, F. (Researcher), Vaz-Moreira, I. (Researcher), Barbosa, J. C. (Researcher), Botelho, J. (Researcher), Machado, M. (Researcher), Barbosa, M. I. (Researcher), Pintado, M. M. (Researcher), Correia, M. (Researcher), Silva, M. N. D. (Researcher), Vasconcelos, M. (Researcher), Teixeira, P. (Researcher), Castro, P. M. L. (Researcher), Rodrigues, P. M. (Researcher), Duarte, R. (Researcher), Mesquita, R. (Researcher), Magalhães, R. (Researcher), Sousa, S. (Researcher), Pereira, S. (Researcher), Ribas, T. (Researcher), Brandão, T. R. S. (Researcher), Alves, P. (Researcher), Almeida, A. (Researcher), Costa, T. (Researcher), Baltazar, A. (Researcher), Sá, C. (Researcher), Ribas, D. (Researcher), Castro, L. (Researcher), Revez, M. J. (Researcher), Carvalho, J. V. (Researcher), Natálio, C. (Researcher), Bordalo, R. (Researcher), Leitão, A. (Researcher), Barbosa Pereira, J. (Project Manager), Machado, A. M. (Fellow), Almeida, D. (Fellow), Salgueiro Maia, I. (Fellow), Medeiros, J. (Researcher), Osorio, J. (Fellow), Pinto, J. (Researcher), Gueidão, M. (Fellow), Castro, N. G. C. D. O. E. (Fellow), Marçal, S. (Fellow) & Costa, T. M. (Fellow)
1/07/25 → 30/06/28
Project: Research
-
URBAN M2O: Effective Monitoring and Modelling solutions for data-driven hOlistic management of URBAN water quality
Manaia, C. (PI), Botelho, J. (Researcher) & Vaz-Moreira, I. (Researcher)
1/06/25 → 31/05/29
Project: Research
-
Using microbial genomics, mathematical modelling and deep learning to investigate the relationship between core gene redundancy and antibiotic resistance
Manaia, C. (PI) & Botelho, J. (CoPI)
1/12/24 → 30/11/30
Project: Research
-
Resistance variation and bacterial interactions shape adaptation of a genetically diverse pathogen population to antibiotic therapy
Batra, A., Tueffers, L., Haas, K., Loeblein, T., Botelho, J., Habig, M., Schuetz, D., Sakalyte, G., Buchholz, F., Berríos-Caro, E., Uecker, H., Unterweger, D. & Schulenburg, H., 26 Feb 2026, In: ISME Journal. 20, 1, 29 p., wrag039.Research output: Contribution to journal › Article › peer-review
Open AccessFile12 Downloads -
Rsm-mediated post-translational control of the pseudomonas putida Type VI1 secretion system
Civantos, C., Paredes, C., Murillo-Torres, M., Botelho, J., Sánchez-Romero, M. A., Allsopp, L. P. & Bernal, P., 10 Jul 2026, bioRxiv, p. 1-50, 50 p.Research output: Working paper › Preprint
Open AccessFile -
Timescale and genetic linkage explain the variable impact of defense systems on horizontal gene transfer
Liu, Y., Botelho, J. & Iranzo, J., 2025, In: Genome Research. 35, 2, p. 268-278 12 p.Research output: Contribution to journal › Article › peer-review
Open Access6 Citations (Scopus) -
Dynamics of CRISPR-mediated virus-host interactions in the human gut microbiome
López-Beltrán, A., Botelho, J. & Iranzo, J., 1 Jan 2024, In: ISME Journal. 18, 1, 13 p., wrae134.Research output: Contribution to journal › Article › peer-review
Open Access11 Citations (Scopus) -
Variation in the response to antibiotics and life-history across the major Pseudomonas aeruginosa clone type (mPact) panel
Tueffers, L., Batra, A., Zimmermann, J., Botelho, J., Buchholz, F., Liao, J., Mejía, N. M., Munder, A., Klockgether, J., Tüemmler, B., Rupp, J. & Schulenburg, H., 11 Jul 2024, In: Microbiology spectrum. 12, 7, 20 p., e0014324.Research output: Contribution to journal › Article › peer-review
Open Access5 Citations (Scopus)
Datasets
-
Scripts for linking EMBOSS fuzznuc/fuzzpro motif-search hits to CDS annotations in Pseudomonas putida KT2440
Botelho, J. (Contributor) & Bernal, P. (Contributor), Zenodo, 8 Jul 2026
Research data
-
Inter-strain interactions in opportunistic pathogen aid survival under antibiotic selection
Research Group Evolutionary Ecology and Genetics, National Center for Biotechnology Information (NCBI), 19 Dec 2024
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1200785/
Research data
Prizes
-
-
-
BSAC Travel grant for the 27th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), held in Wien, Austria, 21-25 April 2017
Botelho, J. F. T. S. (Recipient), 2017
Prize: Other distinction
Activities
-
FCT project budgeting workshop
Botelho, J. (Participant)
19 Feb 2026Activity: Participating in or organising an event › Participating in a conference, workshop, ...
-
Antiphage defence systems and MGE conflict in uncharted integron classes
Botelho, J. (Speaker)
23 Jun 2026Activity: Talk or presentation › Oral presentation
-
Narodowe Centrum Nauki (External organisation)
Botelho, J. (Member)
10 Mar 2026 → 31 Mar 2026Activity: Membership › Evaluation committee
-
Why Active Learning?
Botelho, J. (Participant)
27 Jan 2026Activity: Participating in or organising an event › Participating in a conference, workshop, ...
-
Hidden immunity: exploring antiphage defence systems in unexplored integron classes
Botelho, J. (Invited speaker)
25 Jun 2026Activity: Talk or presentation › Invited talk