TY - JOUR
T1 - Bordetella bronchialis sp. nov., bordetella flabilis sp. nov. and bordetella sputigena sp. nov., isolated from human respiratory specimens, and reclassification of Achromobacter sediminum Zhang et al. 2014 as verticia sediminum gen. nov., comb. nov
AU - Vandamme, Peter A.
AU - Peeters, Charlotte
AU - Cnockaert, Margo
AU - Inganäs, Elisabeth
AU - Falsen, Enevold
AU - Moore, Edward R.B.
AU - Nunes, Olga C.
AU - Manaia, Célia M.
AU - Spilker, Theodore
AU - Lipuma, John J.
PY - 2015/10/1
Y1 - 2015/10/1
N2 - The phenotypic and genotypic characteristics of four Bordetella hinzii-like strains from human respiratory specimens and representing nrdA gene sequence based genogroups 3, 14 and 15 were examined. In a 16S rRNA gene sequence based phylogenetic tree, the four strains consistently formed a single coherent lineage but their assignment to the genus Bordetella was equivocal. The respiratory quinone, polar lipid and fatty acid profiles generally conformed to those of species of the genus Bordetella and were characterized by the presence of ubiquinone 8, of phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol and several aminolipids, and of high percentages of C16: 0, cyclo-C17: 0 and summed feature 2, as major chemotaxonomic marker molecules, respectively. The DNA G+C content was about 66 mol%, which corresponded with that of the high-percentage DNA G+C content genera of the family Alcaligenaceae including the genus Bordetella. DNA–DNA hybridization experiments revealed the presence of three distinct genomospecies and thus confirmed phenotypic differences as revealed by means of extensive biochemical characterization.We therefore propose to formally classify Bordetella genogroups 3, 14 and 15 as Bordetella bronchialis sp. nov. (type strain LMG 28640T=AU3182T=CCUG 56828T), Bordetella sputigena sp. nov. (type strain LMG 28641T=CCUG 56478T) and Bordetella flabilis sp. nov. (type strain LMG 28642T=AU10664T=CCUG 56827T). In addition, we propose to reclassify Achromobacter sediminum into the novel genus Verticia, as Verticia sediminum, gen. nov., comb. nov., on the basis of its unique phylogenetic position, its marine origin and its distinctive phenotypic, fatty acid and polar lipid profile.
AB - The phenotypic and genotypic characteristics of four Bordetella hinzii-like strains from human respiratory specimens and representing nrdA gene sequence based genogroups 3, 14 and 15 were examined. In a 16S rRNA gene sequence based phylogenetic tree, the four strains consistently formed a single coherent lineage but their assignment to the genus Bordetella was equivocal. The respiratory quinone, polar lipid and fatty acid profiles generally conformed to those of species of the genus Bordetella and were characterized by the presence of ubiquinone 8, of phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol and several aminolipids, and of high percentages of C16: 0, cyclo-C17: 0 and summed feature 2, as major chemotaxonomic marker molecules, respectively. The DNA G+C content was about 66 mol%, which corresponded with that of the high-percentage DNA G+C content genera of the family Alcaligenaceae including the genus Bordetella. DNA–DNA hybridization experiments revealed the presence of three distinct genomospecies and thus confirmed phenotypic differences as revealed by means of extensive biochemical characterization.We therefore propose to formally classify Bordetella genogroups 3, 14 and 15 as Bordetella bronchialis sp. nov. (type strain LMG 28640T=AU3182T=CCUG 56828T), Bordetella sputigena sp. nov. (type strain LMG 28641T=CCUG 56478T) and Bordetella flabilis sp. nov. (type strain LMG 28642T=AU10664T=CCUG 56827T). In addition, we propose to reclassify Achromobacter sediminum into the novel genus Verticia, as Verticia sediminum, gen. nov., comb. nov., on the basis of its unique phylogenetic position, its marine origin and its distinctive phenotypic, fatty acid and polar lipid profile.
UR - http://www.scopus.com/inward/record.url?scp=84982728088&partnerID=8YFLogxK
U2 - 10.1099/ijsem.0.000473
DO - 10.1099/ijsem.0.000473
M3 - Article
C2 - 26220296
AN - SCOPUS:84982728088
SN - 1466-5026
VL - 65
SP - 3674
EP - 3682
JO - International Journal of Systematic and Evolutionary Microbiology
JF - International Journal of Systematic and Evolutionary Microbiology
IS - 10
M1 - 33
ER -