TY - JOUR
T1 - Combined use of phosphonium-erythrosin B-based nanoGUMBOS, UV–Vis spectroscopy, and chemometrics for discrimination and quantification of proteins
AU - Azevedo, Ana M. O.
AU - Sousa, Clara
AU - Rodrigues, S. Sofia M.
AU - Chen, Mi
AU - Ayala, Caitlan E.
AU - Pérez, Rocío L.
AU - Santos, João L. M.
AU - Warner, Isiah M.
AU - Saraiva, M. Lúcia M. F. S.
N1 - Funding Information:
This work received financial support from PT national funds (FCT/MCTES, Fundação para a Ciência e Tecnologia and Ministério da Ciência, Tecnologia e Ensino Superior) through the projects UIDB/50006/2020, UIDB/50016/2020, and UIDP/50006/2020. It was also supported by the European Union (FEDER funds through the Operational Competitiveness Program (COMPETE) POCI-01-0145-FEDER-030163 – Project Tailored NanoGUMBOS: The green key to wound infections chemsensing). Ana M.O. Azevedo thanks FCT and FSE (Fundo Social Europeu) through Programa Operacional Regional do Norte for her PhD grant with reference number SFRH/BD/118566/2016. Isiah M. Warner acknowledges support from the National Science Foundation (NSF) under grant # CHE-1905105. The opinions, findings, and conclusions or recommendations expressed are those of the authors and do not necessarily reflect the views of NSF. TEM was performed at the HEMS core facility at i3S, Universidade do Porto, Portugal, with the assistance of Ana Rita Malheiro and Rui Fernandes.
Funding Information:
Ana M.O. Azevedo thanks FCT and FSE (Fundo Social Europeu) through Programa Operacional Regional do Norte for her PhD grant with reference number SFRH/BD/118566/2016 . Isiah M. Warner acknowledges support from the National Science Foundation (NSF) under grant # CHE-1905105 . The opinions, findings, and conclusions or recommendations expressed are those of the authors and do not necessarily reflect the views of NSF.
Funding Information:
This work received financial support from PT national funds (FCT/MCTES, Fundação para a Ciência e Tecnologia and Ministério da Ciência, Tecnologia e Ensino Superior) through the projects UIDB/50006/2020 , UIDB/50016/2020 , and UIDP/50006/2020 . It was also supported by the European Union (FEDER funds through the Operational Competitiveness Program (COMPETE) POCI-01-0145-FEDER-030163 – Project Tailored NanoGUMBOS: The green key to wound infections chemsensing).
Publisher Copyright:
© 2022
PY - 2022/11
Y1 - 2022/11
N2 - Nanoparticles derived from a group of uniform materials based on organic salts (nanoGUMBOS) are considered promising candidates for protein analysis due to their facile synthesis in aqueous media and high tunability. In this study, a phosphonium-erythrosin B-based nanoGUMBOS (i.e., [P4444]2[EB]) was prepared using an ultrasound-assisted reprecipitation method, and its ability to discriminate and quantify proteins was evaluated. Sonication time (30 s, 5 min, and 15 min) and cyclodextrin templating (α-, 2-HP-β-, and γ-CD) were investigated for their effects on discrimination performance of synthesized nanomaterial. Six proteins (albumin, hemoglobin, trypsin, catalase, lysozyme, and cytochrome c) with different abundance levels and physicochemical properties were selected as target analytes. Absorbance response patterns generated from interactions between [P4444]2[EB] nanoGUMBOS and proteins were analyzed using partial least squares discriminant analysis. Percentages of correct protein discrimination ranged from 94.6 to 99.6%, with the latter being the best result obtained using non-templated nanoGUMBOS formed after 5 min sonication. Under optimized conditions, it was possible to discriminate all protein samples with percentages of correct assignments greater than 90% for concentrations as low as 2.0 μg mL−1. The discrimination capability of synthesized nanoGUMBOS was further evaluated using mixtures of different ratios of lysozyme, cytochrome c, and hemoglobin. Finally, partial least squares models were developed for protein quantification and the best performance was observed for albumin. Results support potential use of [P4444]2[EB] nanoGUMBOS in combination with ultraviolet–visible spectroscopy and chemometrics for qualitative and quantitative analyses of individual proteins and mixtures of proteins.
AB - Nanoparticles derived from a group of uniform materials based on organic salts (nanoGUMBOS) are considered promising candidates for protein analysis due to their facile synthesis in aqueous media and high tunability. In this study, a phosphonium-erythrosin B-based nanoGUMBOS (i.e., [P4444]2[EB]) was prepared using an ultrasound-assisted reprecipitation method, and its ability to discriminate and quantify proteins was evaluated. Sonication time (30 s, 5 min, and 15 min) and cyclodextrin templating (α-, 2-HP-β-, and γ-CD) were investigated for their effects on discrimination performance of synthesized nanomaterial. Six proteins (albumin, hemoglobin, trypsin, catalase, lysozyme, and cytochrome c) with different abundance levels and physicochemical properties were selected as target analytes. Absorbance response patterns generated from interactions between [P4444]2[EB] nanoGUMBOS and proteins were analyzed using partial least squares discriminant analysis. Percentages of correct protein discrimination ranged from 94.6 to 99.6%, with the latter being the best result obtained using non-templated nanoGUMBOS formed after 5 min sonication. Under optimized conditions, it was possible to discriminate all protein samples with percentages of correct assignments greater than 90% for concentrations as low as 2.0 μg mL−1. The discrimination capability of synthesized nanoGUMBOS was further evaluated using mixtures of different ratios of lysozyme, cytochrome c, and hemoglobin. Finally, partial least squares models were developed for protein quantification and the best performance was observed for albumin. Results support potential use of [P4444]2[EB] nanoGUMBOS in combination with ultraviolet–visible spectroscopy and chemometrics for qualitative and quantitative analyses of individual proteins and mixtures of proteins.
KW - Chemometrics
KW - NanoGUMBOS
KW - Proteins
KW - Ultraviolet–visible spectroscopy
UR - http://www.scopus.com/inward/record.url?scp=85137180626&partnerID=8YFLogxK
U2 - 10.1016/j.dyepig.2022.110635
DO - 10.1016/j.dyepig.2022.110635
M3 - Article
AN - SCOPUS:85137180626
SN - 0143-7208
VL - 207
JO - Dyes and Pigments
JF - Dyes and Pigments
M1 - 110635
ER -