TY - JOUR
T1 - NAPRT expression regulation mechanisms
T2 - novel functions predicted by a bioinformatics approach
AU - Duarte-Pereira, Sara
AU - Fajarda, Olga
AU - Matos, Sérgio
AU - Oliveira, José Luís
AU - Silva, Raquel Monteiro
N1 - Funding Information:
Acknowledgments: This work was supported by FEDER (Programa Operacional Factores de Competitividade—COMPETE) and by FCT (Fundação para a Ciência e Tecnologia), within the grant SFRH-BD-108890-2015 to SDP, and the projects UIDB/04501/2020 (POCI-01-0145-FEDER-007628) to iBiMED, UIDB/00127/2020 to IEETA and UIDB/04279/2020 to CIIS. We thank FCT/MCTES and UCP for CEEC institutional funding of RMS.
Funding Information:
This research was funded by Funda??o para a Ci?ncia e Tecnologia: SFRH/BD/108890/2015; Funda??o para a Ci?ncia e Tecnologia: UIDB/04501/2020 (POCI-01-0145-FEDER-007628); Funda??o para a Ci?ncia e Tecnologia: UIDB/00127/2020; Funda??o para a Ci?ncia e Tecnologia: UIDB/04279/2020.
Publisher Copyright:
© 2021 by the authors. Licensee MDPI, Basel, Switzerland.
PY - 2021/12
Y1 - 2021/12
N2 - The nicotinate phosphoribosyltransferase (NAPRT) gene has gained relevance in the research of cancer therapeutic strategies due to its main role as a NAD biosynthetic enzyme. NAD metabolism is an attractive target for the development of anti-cancer therapies, given the high energy requirements of proliferating cancer cells and NAD-dependent signaling. A few studies have shown that NAPRT expression varies in different cancer types, making it imperative to assess NAPRT expression and functionality status prior to the application of therapeutic strategies targeting NAD. In addition, the recent finding of NAPRT extracellular form (eNAPRT) suggested the involvement of NAPRT in inflammation and signaling. However, the mechanisms regulating NAPRT gene expression have never been thoroughly addressed. In this study, we searched for NAPRT gene expression regulatory mechanisms in transcription factors (TFs), RNA binding proteins (RBPs) and microRNA (miRNAs) databases. We identified several potential regulators of NAPRT transcription activation, downregulation and alternative splicing and performed GO and expression analyses. The results of the functional analysis of TFs, RBPs and miRNAs suggest new, unexpected functions for the NAPRT gene in cell differentiation, development and neuronal biology.
AB - The nicotinate phosphoribosyltransferase (NAPRT) gene has gained relevance in the research of cancer therapeutic strategies due to its main role as a NAD biosynthetic enzyme. NAD metabolism is an attractive target for the development of anti-cancer therapies, given the high energy requirements of proliferating cancer cells and NAD-dependent signaling. A few studies have shown that NAPRT expression varies in different cancer types, making it imperative to assess NAPRT expression and functionality status prior to the application of therapeutic strategies targeting NAD. In addition, the recent finding of NAPRT extracellular form (eNAPRT) suggested the involvement of NAPRT in inflammation and signaling. However, the mechanisms regulating NAPRT gene expression have never been thoroughly addressed. In this study, we searched for NAPRT gene expression regulatory mechanisms in transcription factors (TFs), RNA binding proteins (RBPs) and microRNA (miRNAs) databases. We identified several potential regulators of NAPRT transcription activation, downregulation and alternative splicing and performed GO and expression analyses. The results of the functional analysis of TFs, RBPs and miRNAs suggest new, unexpected functions for the NAPRT gene in cell differentiation, development and neuronal biology.
KW - Bioinformatics
KW - Cell differentiation
KW - Expression regulation
KW - NAPRT (nicotinate phosphoribosyltransferase)
KW - Neurodevelopment
UR - http://www.scopus.com/inward/record.url?scp=85121650571&partnerID=8YFLogxK
U2 - 10.3390/genes12122022
DO - 10.3390/genes12122022
M3 - Article
C2 - 34946971
AN - SCOPUS:85121650571
VL - 12
JO - Genes
JF - Genes
SN - 2073-4425
IS - 12
M1 - 2022
ER -